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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
UVM cis rs4395360 1 rs7610823 chr3:157319765 C3orf55 chr3:157261159-157319019:+ 0.47 4.94 7.71E-6 Body mass index
UVM cis rs10935120 1 rs7611611 chr3:134307877 ANAPC13 chr3:134196547-134204865:- 0.45 6.73 1.03E-8 Height
UVM cis rs10935120 1 rs7611828 chr3:134250325 ANAPC13 chr3:134196547-134204865:- 0.46 6.87 6.1E-9 Height
UVM cis rs10935120 1 rs7619451 chr3:134233238 ANAPC13 chr3:134196547-134204865:- 0.48 5.35 1.74E-6 Height
UVM cis rs4395360 1 rs7620791 chr3:157319549 C3orf55 chr3:157261159-157319019:+ -0.4 -4.6 2.51E-5 Body mass index
UVM cis rs78153629 1 rs76277863 chr15:40649863 C15orf23 chr15:40674922-40686488:+ 0.92 6.68 1.27E-8 Heschl's gyrus morphology
UVM cis rs4395360 1 rs7629794 chr3:157320796 C3orf55 chr3:157261159-157319019:+ -0.41 -4.64 2.2E-5 Body mass index
UVM cis rs9876781 1 rs7630741 chr3:48419723 TREX1 chr3:48501186-48509043:+ -0.42 -4.99 6.38E-6 Longevity
UVM cis rs10935120 1 rs7630874 chr3:134293291 ANAPC13 chr3:134196547-134204865:- -0.45 -6.73 1.03E-8 Height
UVM cis rs9876781 1 rs7634377 chr3:48421258 TREX1 chr3:48501186-48509043:+ -0.42 -4.99 6.38E-6 Longevity
UVM cis rs9876781 1 rs7635522 chr3:48423656 TREX1 chr3:48501186-48509043:+ -0.4 -4.98 6.56E-6 Longevity
UVM cis rs9876781 1 rs7636044 chr3:48484560 TREX1 chr3:48501186-48509043:+ -0.4 -4.9 8.74E-6 Longevity
UVM cis rs9876781 1 rs7636782 chr3:48421387 TREX1 chr3:48501186-48509043:+ -0.42 -5.01 6.05E-6 Longevity
UVM cis rs10935120 1 rs7637227 chr3:134244155 ANAPC13 chr3:134196547-134204865:- 0.46 6.87 6.1E-9 Height
UVM cis rs4395360 1 rs7641541 chr3:157320946 C3orf55 chr3:157261159-157319019:+ -0.4 -4.6 2.51E-5 Body mass index